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2013
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January 2013
Kerstin Forsberg
@kerfors
Replying to
@eClinical_Jen
@eClinical_Jen
As a software vendor and data standard implementor: see
twitter.com/kerfors/status…
Jan 31, 2013 · 07:42 AM
0
0
Kerstin Forsberg
@kerfors
Planning next
#CDISC2RDF
blog post
cdisc2rdf.com
Practical steps to enrich and transform
#CDISC
standards in Excel to RDF
Jan 30, 2013 · 08:22 PM
1
1
Kerstin Forsberg
@kerfors
“The
#LinkedData
principles provide a common API for data on the web .. instead of many seperate APIs”
3roundstones.com/2012/12/04/new…
Jan 30, 2013 · 08:14 PM
2
1
Kerstin Forsberg
@kerfors
I'm reading
@Prototypo
's,
@mhausenblas
' et al
#LinkedData
book under development
3roundstones.com/2012/12/04/new…
Jan 30, 2013 · 08:10 PM
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0
Kerstin Forsberg
@kerfors
Replying to
@statsguyuk
@dianthusmed
Thanks - will digest and get back
Jan 30, 2013 · 08:03 PM
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0
Kerstin Forsberg
@kerfors
Replying to
@EMA_News
.
@EMA_News
Let us know when you're looking for volunteers to test your information published as
#LinkedData
5stardata.info
Jan 30, 2013 · 03:55 PM
0
0
Kerstin Forsberg
@kerfors
Replying to
@statsguyuk
My comments on
@dianthusmed
's blog post on sharing raw clinical trials data
dianthus.co.uk/sharing-raw-da…
#ctdata
Jan 29, 2013 · 10:36 PM
2
1
Kerstin Forsberg
@kerfors
NCI Thesaurus has terms for
#CDISC
Lab Tests e.g. Hemoglobin,("HGB") but not for the outcome Data Element
Jan 29, 2013 · 08:32 PM
0
1
Kerstin Forsberg
@kerfors
I just learned that NCI Thesaurus defines
#CDISC
Data Element terms e.g. ORRES, LBORRES
bioportal.bioontology.org/ontologies/476…
Jan 29, 2013 · 08:09 PM
0
1
Kerstin Forsberg
@kerfors
Intersting blog: Better diagnosis coding, by Bill Hogan, that I am now following:
no-icd10cm.blogspot.se
#ontology
Jan 29, 2013 · 06:23 PM
0
2
Kerstin Forsberg
@kerfors
American Cardiology Society Makes Ontological Errors, by Billy Hogan,
ontologyblog.blogspot.se/2013/01/cardio…
(via
hl7-watch.blogspot.se
)
#ontology
Jan 29, 2013 · 06:22 PM
0
0
Kerstin Forsberg
@kerfors
Check out "Länkade data i Sverige"
ldsv2013-estw.eventbrite.com
via
@bBalsa
#LinkedData
#LankadeData
#ldsv
Jan 29, 2013 · 01:19 PM
1
0
Kerstin Forsberg
@kerfors
Visual tools for
#SemanticWeb
notes.3kbo.com/visual
e.g.
#d3js
d3js.org
< ping
@fredrikcelin
Jan 28, 2013 · 08:35 PM
2
3
Kerstin Forsberg
@kerfors
MT
@mlamoure
: Expert Cecil Lynch says "Value Set Versioning" isn't discussed enough in the
#semanticweb
world < also a
#EHR4CR
topic
Jan 28, 2013 · 07:27 PM
0
0
Kerstin Forsberg
@kerfors
MT
@glaforge
:
#groovy
meets
#semanticweb
:
linkedjava.blogspot.fr/2011/07/linked…
< ping
@johaneltes
Jan 27, 2013 · 04:41 PM
0
2
Kerstin Forsberg
@kerfors
Pointing colleagues to free online
#SemanticWeb
course, starts 4 Feb
semanticweb.com/free-course-on…
Jan 25, 2013 · 07:03 PM
1
2
Kerstin Forsberg
@kerfors
Replying to
@statsguyuk
@dianthusmed
will do
Jan 25, 2013 · 06:58 PM
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0
Kerstin Forsberg
@kerfors
Likewise :) RT
@pgroth
meet at
@kerfors
at a electronic healthcare records meeting - great to meet tweeter people in person!
Jan 25, 2013 · 06:58 PM
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0
Kerstin Forsberg
@kerfors
Replying to
@statsguyuk
@dianthusmed
Helps human to understand how SDTM IG have been interpret per study. For max. cross study analysis potential, see prev link
Jan 25, 2013 · 06:56 PM
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0
Kerstin Forsberg
@kerfors
#CDISC2RDF
cdisc2rdf.com
will be presented at
#CSHALS
iscb.org/cshals2013
28 Feb. I'll not be able to participate :-(
Jan 25, 2013 · 06:47 PM
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0
Kerstin Forsberg
@kerfors
Replying to
@statsguyuk
.
@dianthusmed
#CDISC
SDTM do not mean "anyone ... would know exactly what the data mean", see
w3.org/2012/Talks/110…
#ctdata
Jan 25, 2013 · 06:30 PM
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0
Kerstin Forsberg
@kerfors
Replying to
@eClinical_Jen
@eClinical_Jen
thanks :)
Jan 25, 2013 · 06:19 PM
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0
Kerstin Forsberg
@kerfors
One more thing to follow up from
#EHR4CR
meeting: PHAST Common Terminology Services 2 (CTS 2)
wiki.phast.fr/index.php?titl…
)
Jan 24, 2013 · 06:22 PM
0
0
Kerstin Forsberg
@kerfors
Replying to
@larsga
Cool
#SemanticWeb
#bigdata
project: Optique
optique-project.eu/about-optique/…
via
@larsga
Jan 24, 2013 · 04:42 PM
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Kerstin Forsberg
@kerfors
@Prototypo
cool :)
Jan 24, 2013 · 04:37 PM
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Kerstin Forsberg
@kerfors
Great to see W3C HCLS wiki page: Clinical Observations Interop. w/ links to EU/US initiatives
w3.org/wiki/HCLS/Clin…
#EHR4CR
Jan 24, 2013 · 04:00 PM
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0
Kerstin Forsberg
@kerfors
Study Design Model from
#CDISC
, yet another "model" to have look at in the next step of
#CDISC2RDF
, from the
#EHR4CR
meeting
Jan 24, 2013 · 03:53 PM
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0
Kerstin Forsberg
@kerfors
Listening to Landen Bain,
#CDISC
, on Clinical Research Document (CRD)
ihe.net/Technical_Fram…
at
#EHR4CR
meeting
Jan 24, 2013 · 03:47 PM
0
0
Kerstin Forsberg
@kerfors
Listening to Landen Bain,
#CDISC
, on a new IHE profile, Data Element Exchange (DEX), to retrieve
#metadata
using XPath
#EHR4CR
Jan 24, 2013 · 03:43 PM
0
0
Kerstin Forsberg
@kerfors
Nice demo from ISWC2012:
youtu.be/KHtlARfex4c
Interesting paper: Efficient SPARQL-to-SQL for RDF and OWL
iswc2012.semanticweb.org/sites/default/…
Jan 24, 2013 · 10:20 AM
0
1
Kerstin Forsberg
@kerfors
+1 RT
@AntoanetaVlad
: The Future of Medical Records - The Atlantic
theatlantic.com/health/archive…
Jan 23, 2013 · 09:50 PM
1
1
Kerstin Forsberg
@kerfors
I introduced the
#CDISC2RDF
project at the
#EHR4CR
meeting today
cdisc2rdf.com
Nice response
Jan 23, 2013 · 09:42 PM
1
2
Kerstin Forsberg
@kerfors
Replying to
@mavergames
+10 “creating the best partnership between people and machines”
bmj.com/content/346/bm…
@mavergames
et al
#LinkedData
Jan 22, 2013 · 05:42 AM
1
1
Kerstin Forsberg
@kerfors
Replying to
@MBstream
@MBstream
Many thanks for your RT and favs
Jan 22, 2013 · 05:35 AM
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0
Kerstin Forsberg
@kerfors
.
@EMA_News
Why not publish reference info such as
ema.europa.eu/ema/index.jsp?…
as 5-star
#LinkedData
#opendata
5stardata.info
?
Jan 22, 2013 · 05:03 AM
0
1
Kerstin Forsberg
@kerfors
. @IMI_JU Why not publish datasets such as
imi-protect.eu/methodsRep.sht…
as 5-star
#LinkedData
#opendata
5stardata.info
?
Jan 22, 2013 · 04:56 AM
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Kerstin Forsberg
@kerfors
Q: How avoid the copy-and-paste frustration of data standards implementors? A: Use RDF. Ping
@CDISC
#CDISC
cdiscguru.blogspot.se/2012/12/anothe…
Jan 21, 2013 · 09:32 PM
3
2
Kerstin Forsberg
@kerfors
Replying to
@eClinical_Jen
@eClinical_Jen
Thanks for RT - this is a milestone for what kicked of at CDISC EU 2011 and 2012 :)
Jan 21, 2013 · 06:23 PM
0
0
Kerstin Forsberg
@kerfors
I look forward to the Convergence meeting tomorrow on semantic interop. w/
@Open_PHACTS
@eTRIKS1
#EHR4CR
@SALUSProject_EU
@Linked2Safety
Jan 21, 2013 · 06:10 PM
1
1
Kerstin Forsberg
@kerfors
Replying to
@getehrright
@getehrright
Thanks, I spotted it via:
twitter.com/kerfors/status…
Jan 21, 2013 · 06:09 PM
0
0
Kerstin Forsberg
@kerfors
Direct link to the
#CDISC2RDF
ontologies
code.google.com/p/cdisc2rdf/so…
See also my blog post:
cdisc2rdf.com
#CDISC
Jan 21, 2013 · 05:37 PM
1
3
Kerstin Forsberg
@kerfors
+1 MT @frepa: Öppna länkade data för skolan
vinnova.se/sv/Resultat/Pr…
#öppnadata
#oerswe
#LankadeData
#ldsv
Jan 21, 2013 · 05:29 PM
0
1
Kerstin Forsberg
@kerfors
+1 RT @egonwillighagen: Fwd: chem-bla-ics: CHEMINF example #1: encoding InChIs
bit.ly/Sr66YI
(cc
@Open_PHACTS
)
Jan 21, 2013 · 05:22 PM
0
1
Kerstin Forsberg
@kerfors
Thinking of ontology options for semantic indexing of clinical datasets: Data Def. (DDO), ISO11179: SALUS full, or CDISC2RDF's simplified
Jan 20, 2013 · 10:02 PM
0
1
Kerstin Forsberg
@kerfors
Machine *Processable* (Data reasonably structured to allow automated processing) GT / > Machine Readable
opengovdata.io/2012-02/page/5…
Jan 20, 2013 · 09:59 PM
0
1
Kerstin Forsberg
@kerfors
New blog post: First version of
#CDISC2RDF
published
cdisc2rdf.com/2013/01/20/fir…
#CDISC
#SemanticWeb
Jan 20, 2013 · 07:01 PM
3
2
Kerstin Forsberg
@kerfors
Data Definition Ontology (based on
#D2RQ
) for clinical data integration
ncbi.nlm.nih.gov/pubmed/22874148
< What about defining SAS datasets?
Jan 20, 2013 · 05:42 PM
0
1
Kerstin Forsberg
@kerfors
Replying to
@egombocz
@egombocz
Your question to Barry re. Charlie's/Lloyd's work on OWL/MIF representation. Did you get any response? As he only responed re. LD
Jan 20, 2013 · 05:22 PM
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Kerstin Forsberg
@kerfors
Barry Smith in An Ontologist's Guide to
#HL7
bioontology.org/ontologist%27s…
[webcast]:
#OGMS
is how the HL7 should be"
code.google.com/p/ogms/
Jan 20, 2013 · 04:51 PM
1
1
Kerstin Forsberg
@kerfors
+10 Opening Walled Gardens: RDF/LinkedData as the Universal Exchange Language for Healthcare
dbooth.org/2013/mu/MU-Sta…
#MeaningfulUse
Jan 20, 2013 · 08:34 AM
1
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Kerstin Forsberg
@kerfors
A late
#FF
#FollowFriday
goes to
@JohnMHancock
for his great feed of links to papers in
#semanticweb
#ontology
#informatics
Jan 18, 2013 · 07:43 PM
1
1
Kerstin Forsberg
@kerfors
Would be grat to have that > RT
@bioontology
:
@pgroth
Have you sent follow-up on a proposal to use PROV-O in BioPortal?
Jan 18, 2013 · 06:51 PM
0
1
Kerstin Forsberg
@kerfors
Great discussions w/ @aasinaci and Gokce Laleci about
#MDR
based on
#ISO11179
at
@SALUSProject_EU
meeting
#SemanticWeb
Jan 17, 2013 · 05:57 PM
3
0
Kerstin Forsberg
@kerfors
Early, cold morning on my way to
@SALUSProject_EU
's Advisory Board meeting. Dissemination. material:
srdc.com.tr/projects/salus…
Jan 16, 2013 · 05:06 AM
1
0
Kerstin Forsberg
@kerfors
My comment on
@dWiseTech
's blog: The Past, Present, and Future of Clinical Data Standards
hub.am/XjXToe
Jan 15, 2013 · 10:08 PM
1
1
Kerstin Forsberg
@kerfors
The world is heating up, smartly visualized w/
#opendata
bit.ly/TYIHgy
via
@stereogab
@jahendler
Jan 15, 2013 · 09:39 PM
0
0
Kerstin Forsberg
@kerfors
Listening to
@gray_alasdair
presenting
@Open_PHACTS
dataset descriptions
openphacts.org/specs/datadesc/
Slides
slideshare.net/alasdair_gray/…
Jan 14, 2013 · 04:27 PM
0
0
Kerstin Forsberg
@kerfors
The Past, Present, Future of Clinical Data Stds
hub.am/XjXToe
@dWiseTech
< "Shadows of things that May be", see
w3.org/2012/Talks/110…
Jan 12, 2013 · 05:01 PM
2
2
Kerstin Forsberg
@kerfors
Reading
@dWiseTech
's "The Past, Present, and Future of Clinical Data Standards"
hub.am/XjXToe
Jan 12, 2013 · 04:58 PM
0
0
Kerstin Forsberg
@kerfors
Top 10 Medical Research Trends to Watch in 2013
huffingtonpost.com/mobileweb/marg…
< No 7 Data standards:
#CDISC
#TransCelerate
Jan 12, 2013 · 03:56 PM
0
1
Kerstin Forsberg
@kerfors
MT
@bioontology
: An Ontologist's Guide to
#HL7
, Barry Smith
shrd.by/bZ1eAj
< Interesting NCBO Webinar in the
#HL7WGM
week
Jan 12, 2013 · 03:20 PM
0
1
Kerstin Forsberg
@kerfors
To read "Classifying Processes: An Essay in Applied Ontology"
ontology.buffalo.edu/smith/articles…
#ProcessProfiles
Jan 10, 2013 · 08:01 PM
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Kerstin Forsberg
@kerfors
Replying to
@trished
@trished
Thanks I'll look more into SPIRIT
Jan 10, 2013 · 08:33 AM
0
0
Kerstin Forsberg
@kerfors
+1 MT
@trished
: News in
#BMJ
is paywalled; but research isn't, nor our editorials on setting data free< Re.
bmj.com/content/346/bm…
#AllTrials
Jan 10, 2013 · 08:32 AM
0
1
Kerstin Forsberg
@kerfors
Great quote "Ontological understanding of data is more critical then the volumes of data"
@john_reynders
#jpm13
via
@JonathanHirsch
Jan 09, 2013 · 08:01 PM
0
1
Kerstin Forsberg
@kerfors
MT
@trished
: SPIRIT 2013 (Std Protocol Items: Rec. for Interventional Trials)
bmj.com/content/346/bm…
<< Relationship to
#CDISC
?
Jan 09, 2013 · 02:00 PM
0
0
Kerstin Forsberg
@kerfors
Anyone know when Google's Medication Knowledge Graph willl be available?
thenextweb.com/google/2012/11…
Jan 08, 2013 · 09:48 PM
0
1
Kerstin Forsberg
@kerfors
Top Five Facts about Google’s Medication Knowledge Graph
p.ost.im/p/dUkynX
Jan 08, 2013 · 09:31 PM
1
1
Kerstin Forsberg
@kerfors
I learned about Research Data Alliance
@RD_Alliance
today. Launch and First Plenary in March
rd-alliance.org/invitation/
In Gothenburg!
Jan 08, 2013 · 08:38 PM
1
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Kerstin Forsberg
@kerfors
MT @jcdecker71: Have an idea to collaborate with the FDA?
phuse.eu/Call_for_NewPr…
< Yes: Max. x-study analysis potential
w3.org/2012/Talks/110…
Jan 08, 2013 · 08:23 PM
0
1
Kerstin Forsberg
@kerfors
Summary of the
#FDA
Study Data Exchange meeting
ow.ly/gxGTG
RDF is still winning in
@PHUSETwitta
's poll
ow.ly/gckog
Jan 08, 2013 · 07:55 PM
0
2
Kerstin Forsberg
@kerfors
Short n' sweet talk "Why Schema[.]org (for libraries)"
@rjw
slides:
slideshare.net/rjw/why-schema…
audio:
scivee.tv/assets/audio/5…
#linkeddata
Jan 08, 2013 · 07:40 PM
1
2
Kerstin Forsberg
@kerfors
Yes! > "Is Linked Data the future of data integration in the enterprise?"
blog.nxp.com/is-linked-data…
via
@iradche
#LinkedData
Jan 07, 2013 · 05:03 PM
5
1
Kerstin Forsberg
@kerfors
+1 RT
@hughglaser
: It's so hard to do to the pain of SQL when you have got used to the ease of
#SPARQL
.
Jan 06, 2013 · 07:15 PM
3
0
Kerstin Forsberg
@kerfors
"There was general interest in semantic web," from
@US_FDA
's meeting on Study Data Exchange standards
fda.gov/Drugs/Developm…
Jan 03, 2013 · 10:28 AM
0
1
Kerstin Forsberg
@kerfors
MT
@SemanticWeb
: Semantic Tech Outlook: 2013
bit.ly/UI4aLr
#LinkedData
#SemanticWeb
Jan 02, 2013 · 03:20 PM
3
1
Kerstin Forsberg
@kerfors
Slow start of 2013: Some reading in prep. for
@SALUSProject_EU
's Advisory Board meeting and @IMI_JU
#EHR4CR
workshop in mid Jan.
Jan 02, 2013 · 10:12 AM
0
1
Kerstin Forsberg
@kerfors
My 3rd online course 2013 starts in April: Introduction to Data Science
by
@billghowe
via
@coursera
See
kerfors.blogspot.se/2012/12/my-moo…
#MOOC
Jan 02, 2013 · 10:03 AM
0
0
Kerstin Forsberg
@kerfors
My 2nd online course 2013 start in April: Data Management for Clinical Research
via
@coursera
See
kerfors.blogspot.se/2012/12/my-moo…
#MOOC
Jan 02, 2013 · 10:01 AM
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0
Kerstin Forsberg
@kerfors
My first online course 2013 starts 4 Febr:
#SemanticWeb
Technologies by
@lysander07
See
kerfors.blogspot.se/2012/12/my-moo…
#MOOC
Jan 02, 2013 · 09:57 AM
0
0