@kerfors — February 2015

@marcusosterberg hoppas några kollegor är där

Feb 27, 2015 · 07:53 AM 0 0

@marcusosterberg ah, detta har jag missat. Det blir till kolla lite på #sigmaevents under dagen

Feb 27, 2015 · 07:51 AM 0 0

Replying to @omowizard

"the wicked problem of managing clinical questionnaires" bit.ly/1EvrQJb HT @omowizard <- FoodForThought for @CDISC Research Concepts

Feb 27, 2015 · 07:31 AM 3 1

Replying to @PistoiaAlliance

@PistoiaAlliance @asrowe Looking forward to see the recording of it - too many interesting webinars yesterday afternoon

Feb 27, 2015 · 07:19 AM 0 0

Mappings b/t tabular data end-to-end. RDF can represent, but why not capture and annotate data as RDF graphs instead?

Feb 26, 2015 · 07:35 PM 2 2

Nice to hear @swhume recognise the value of RDF for CDISC in @CDISC webinar about Research Objects and @cdiscSHARE

Feb 26, 2015 · 07:21 PM 1 3

I just joined "Göteborg NoSQL Meetup" meetup.com/Goteborg-NoSQL… #nosql #gbgftw

Feb 26, 2015 · 06:48 PM 2 0

Today's fun on the bus home is to watch the @CDISC webinar on Research Conceptd (RC) and @cdiscSHARE

Feb 26, 2015 · 04:53 PM 0 0

In a #EHR4CR webinar about the new: European Institute for Innovation through Health Data (youtube recording later)

Feb 26, 2015 · 03:52 PM 0 1

Replying to @TAC_NISO

@TAC_NISO Do you mean validation of mappings? srdc.com.tr/projects/salus… cc: @SALUSProject_EU

Feb 26, 2015 · 03:26 PM 0 0

Replying to @TAC_NISO

@TAC_NISO Agree, see our joint @Open_PHACTS @IMI_JU #EHR4CR @SALUSProject_EU proposed framework slideshare.net/mobile/kerfors…

Feb 26, 2015 · 02:13 PM 2 1

Replying to @Phil_at_OeRC

@Phil_at_OeRC @BioSharing @NIH_BD2K @eTRIKS1 See also @SALUSProject_EU Data Elements srdc.com.tr/projects/salus… using github.com/srdc/semanticM…

Feb 26, 2015 · 02:08 PM 2 1

@TAC_NISO @anitawaard BO popular research topic in Scandinavia - will get back with refs

Replying to @TAC_NISO

Feb 25, 2015 · 04:55 PM 0 0

On the bus watching Workshop on Community-Based Data and Metadata Standards 1.usa.gov/19x0SoY #BD2K @NIH_BD2K

Feb 25, 2015 · 04:34 PM 0 1

Replying to @chrhe894

@chrhe894 Hej Christer, dags för ny Länkade Data träff, Göteborg 28 april eventbrite.com/e/lankade-data… Intresserad att ge en uppdatering?

Feb 24, 2015 · 06:05 PM 0 0

FHIR JSON-LD update (David Booth) dbooth.org/2015/fhir/json… in the HL7 RDF subgroup #FHIR #JSONLD

Feb 24, 2015 · 04:38 PM 1 3

Feb 24, 2015 · 03:55 PM 0 0

Replying to @stephensenn

@stephensenn nice :)

+1 RT @Lilly_COI: Could @iodine's approach to simplifying online drug information be applied to #clinicaltrials? ow.ly/JA93H

Replying to @LillyTrials

Feb 24, 2015 · 03:50 PM 0 1

To read: The Cardiovascular Disease Ontology researchgate.net/publication/26…

Feb 24, 2015 · 10:19 AM 0 1

Reposting a link to a great paper: "Temporal disease trajectories condensed from population-wide registry data.. ift.tt/1qBa1jU

Feb 24, 2015 · 10:05 AM 0 0

@micheldumontier Hi Michel: “@philarcher1: .@bio2rdf bio2rdf seems to be down. Temporary glitch? Bigger problem? /cc @kerfors”

Replying to @philarcher1

Feb 24, 2015 · 09:06 AM 0 0

Nice to be in a pre-kick-off tc/online meeting PhUSE: Representing Clinical Program Design in RDF phusewiki.org/wiki/index.php…

Feb 23, 2015 · 04:03 PM 1 1

Replying to @carlrodrigues

@carlrodrigues Thanks for following Carl. Good discussion the other day.

Feb 22, 2015 · 06:38 PM 0 0

Replying to @BecomingDataSci

@BecomingDataSci Yepp :-)

Feb 22, 2015 · 06:32 PM 0 0

Just learned about Allotrope Foundation to facilitate pharmas/biotechs to build a lab data sharing framework allotrope.org

Feb 22, 2015 · 06:28 PM 0 1

Two new names on my #FollowFriday list medium.com/@kerfors/my-fo… - 1) @BecomingDataSci, 2) @dpatil US First Chief Data Scientist #datascience

Feb 22, 2015 · 06:09 PM 1 2

This weeks #ff #FollowFriday is @BecomingDataSci I'll be back during the weekend with a note on why I follow Renee

Feb 20, 2015 · 05:29 PM 1 0

@JeniT @danbri @ivan_herman Sorry, I mean a use case of integrating tabular data with @SASInstitute platform similar as for Sporfire/TIBCO

Replying to @JeniT

Feb 20, 2015 · 03:23 PM 0 0

#CSVW: Tabular CSV Data + METADATA as RDF JSON JSONLD <- Would like a SAS use case w3c.github.io/csvw/use-cases… cc: @JeniT @danbri @ivan_herman

Feb 20, 2015 · 03:03 PM 1 1

"date-time string formats" also discussed in #csvw metadata for "CVS on the Web" github.com/w3c/csvw/issue… <- Add SAS sas.com/store/books/ca…

Feb 20, 2015 · 02:56 PM 0 1

OH: "Dates - the most challenging thing in clinical trial data." <- Would love to see a really good guide on this topic cc; @dWiseTech

Feb 20, 2015 · 02:41 PM 0 1

+1 RT @karinahlin: Love this interview with a passionate female researcher and Nobel laureate, May-Britt Moser - huffingtonpost.com/2015/02/19/may…

Replying to @karinahlin

Feb 20, 2015 · 07:29 AM 0 1

Project Open Data - Project Open Data #opendata project-open-data.cio.gov

Feb 20, 2015 · 07:26 AM 2 4

"It’s not easy to face up to all the informational chaos that a cataloging effort can reveal." --@tdav linkedin.com/pulse/its-way-…

Replying to @tdav

Feb 19, 2015 · 07:51 PM 0 0

"cataloging data is worth the trouble and shock at the outcome." --@tdav linkedin.com/pulse/its-way-…

Replying to @tdav

Feb 19, 2015 · 07:50 PM 0 0

@marcusosterberg @FotografFilipA Perfekt!

Feb 19, 2015 · 07:18 PM 0 0

"We publish the de-id.standards in practical Excel format so it's not seen as a academia product."--@PHUSETwitta <- Why not publish in RDF?

Feb 19, 2015 · 06:58 PM 0 0

I'm in @privacyanalytic's Responsible De-id. of Clinical Trial Data Webinar with Project Data Sphere and PhUSE bit.ly/1z7QxEz

Feb 19, 2015 · 06:20 PM 0 0

@PetterWolff @marcusosterberg Japp 28 april - draft meet up inbjudan eventbrite.com/e/lankade-data…

Replying to @PetterWolff

Feb 19, 2015 · 06:05 PM 0 0

@marcusosterberg @PetterWolff Vi kommer att vara inkluderande - data: big, open, linked, etc Vi återkommer.

Feb 19, 2015 · 05:59 PM 0 0

@marcusosterberg Kul! Ser framåt att pratas vid vår länkade data meetup

Feb 19, 2015 · 05:43 PM 0 0

Replying to @subatomicdoc

@subatomicdoc Thx Matthew

Feb 19, 2015 · 03:50 PM 0 0

Feb 19, 2015 · 03:49 PM 0 0

Replying to @Rad_Nation

@Rad_Nation Thx

Great, I'll try to follow #hadoopngs -> MT @mikaelhuss: At the Hadoop NGS workshop at #KTH in Kista today biobankcloud.com/?q=node/34

Feb 19, 2015 · 10:09 AM 2 2

Nice to see @Roche as the first pharma company in the @UKODImembers list as a Supporter of @ODIHQ #opendata

Feb 18, 2015 · 05:07 PM 1 2

Replying to @MedicalEvidence

@MedicalEvidence interesting ! Thanks will read in more details

Feb 18, 2015 · 11:55 AM 0 0

Feb 17, 2015 · 07:46 PM 0 0

@LexJansen Thx Lex

@cdsouthan time to catch up? Ping me next time you are on site

Replying to @cdsouthan

Feb 17, 2015 · 05:20 PM 0 0

Replying to @martinkl

On my #ToReadList HT @mhausenblas -> MT @martinkl: I transcribed my #devwinter talk into a @confluentinc blog post blog.confluent.io/2015/01/29/mak…

Feb 17, 2015 · 07:30 AM 0 0

@pharmagossip @AlinaDeniau @CampOther @Quanticate @semwebcompany @cdsouthan @mavergames Thx for RTs

Feb 17, 2015 · 07:24 AM 0 0

Feb 17, 2015 · 07:16 AM 0 0

Replying to @mavergames

@mavergames Thx Chris

RT: Twitter the right prescription for sharing health research: @UBC Study bit.ly/17bOlFO

Feb 16, 2015 · 07:52 PM 0 0

New blog post: Clinical Trial Data Transparency and Linked Data kerfors.blogspot.se/2015/02/clinic… #ctdata #AllTrials #LinkedData #datasharing

Feb 16, 2015 · 07:27 PM 9 9

Watching video from the release of @theIOM report: Sharing Clinical Trial Data: Maximizing Benefits, Minimizing Risk iom.edu/reports/2015/s…

Feb 16, 2015 · 07:23 PM 0 1

Replying to @timoreilly

Same in Swedish :-) MT @timoreilly: Love the word friluftsliv - Norwegian for "free air life” bit.ly/1Ae0qV7 via @sarawinge

Feb 16, 2015 · 02:49 PM 0 0

Nice overview of standards being used in @Open_PHACTS to integrate biomedical data openphacts.org/documents/Pres…

Feb 16, 2015 · 09:16 AM 2 0

On the bus watching 1st week of #FLValuingHealth MOOC to learn more about PROMS and QALYS. futurelearn.com/courses/valuin…

Feb 16, 2015 · 07:41 AM 2 0

Great to see #linkeddata in @anitawaard's slides slideshare.net/anitawaard/clo… from #AAASmtg Panel on Clinical Trials bit.ly/AllTrialsAAAS

Feb 16, 2015 · 07:24 AM 0 4

Replying to @kelemam

"Uniqueness does not equal re-identification" blogs.bmj.com/bmj/2015/02/06… @kelemam critiques @ScienceMagazine's credit card study

Feb 16, 2015 · 07:11 AM 0 1

Replying to @senseaboutsci

MT @senseaboutsci: Interested in how clinical data can be usefully shared, indexed & linked? #AAASmtg #AllTrials <- Yes esp indexed & linked

Feb 15, 2015 · 05:13 PM 0 1

@Chris_Evelo Ah yes. I'll talk catch up with Ola E from AZ in Open PHACTS

Replying to @Chris_Evelo

Feb 15, 2015 · 01:59 PM 0 0

@Chris_Evelo not reallly an area I know about

Replying to @Chris_Evelo

Feb 15, 2015 · 01:40 PM 0 0

@Chris_Evelo yes, Alasdair is so on the team of authors :)

Replying to @Chris_Evelo

Feb 15, 2015 · 01:29 PM 0 1

Thankful for working with a small team taking the early ideas of terminology mapping justifications kerfors.blogspot.se/2013/09/justif… one step further

Feb 15, 2015 · 08:46 AM 2 1

Started the morning doing some edits in a joint research paper using @overleaf And just learned it has @github sync overleaf.com/blog/195-new-c…

Replying to @overleaf

Feb 15, 2015 · 08:43 AM 2 3

Replying to @dret

+10 RT @dret: if your #UI isn't backed by an #API (public or not), you're doing it wrong.

Feb 13, 2015 · 05:20 PM 0 1

My #FF #FollowFriday this week is @andrewsu, see my 2015 list on why I follow him medium.com/@kerfors/my-fo… and other favourites

Feb 13, 2015 · 02:50 PM 3 1

I just completed Quest 1 in #Mark2Cure. Join me & help researchers find cures FASTER. If you can read, you can help mark2cure.org

Feb 12, 2015 · 07:41 PM 0 0

RT @LexJansen: "The power of UCUM: unit conversions using web services" #cdisc cdisc-end-to-end.blogspot.com/2015/02/the-po…

Feb 12, 2015 · 07:07 PM 0 0

Reading about #microservices and trying to understand if a resolveable URI service is an example? #LinkedData

Feb 12, 2015 · 03:55 PM 0 0

On the bus home catching up with the interesting #PMINetwork feed from Precision Medicine workshop

Feb 12, 2015 · 03:30 PM 0 1

@rhiaro Hmm :-( Will @LDFragments make things better? cc: @RubenVerborgh

Replying to @rhiaro

Feb 12, 2015 · 12:38 PM 0 0

@plample_ Thanks for RTs and interactions. How about catching on phone some day?

Replying to @plample_

Feb 11, 2015 · 11:40 AM 0 0

@Assero_UK Have you had the time to looked at the "CDISC in RDF guide"? cdisc.org/standards/data…

Feb 11, 2015 · 11:39 AM 0 0

@Assero_UK not sure, maybe

Feb 11, 2015 · 09:51 AM 0 0

@Assero_UK looking forward - I'm just now sharing your blog post on our internal Yammer

Feb 11, 2015 · 09:47 AM 0 0

@Assero_UK Yes,good point. When we argued for variants/configs 6-8 years ago people said: "Standards don't change".

Feb 11, 2015 · 09:41 AM 1 0

An urge for version mgmt #CDISC content from @Assero_UK assero.co.uk/2015/content-c… <- Hence configs of variants #ISO11179 slideshare.net/mobile/kerfors…

Feb 10, 2015 · 05:31 PM 0 0

Wow - the "fyr-klöver" is here, again :-) "Using #ISO11179 to harmonize data elements between clinical models" w3.org/2015/Talks/020…

Feb 10, 2015 · 04:45 PM 0 0

@Prototypo Very good course. Great to see your recent ML/AI intensive feed David

Feb 10, 2015 · 02:28 PM 0 0

Replying to @nicolastorzec

MT @nicolastorzec: So open.fda.gov provides APIs.. (via @pmika) <- We hope it will be #linkeddata github.com/FDA/openfda/is…

Feb 09, 2015 · 06:30 AM 0 0

I registered for the Webinar: Responsible De-Id with Clinical Trial data @privacyanalytic #deidentification info.privacyanalytics.ca/EV-2015-CTT-we…

Feb 08, 2015 · 09:11 AM 1 0

@andrewsu very nice slide deck Andrew - I would like to hear you talking to these

Replying to @andrewsu

Feb 08, 2015 · 07:44 AM 0 1

Replying to @dWiseTech

MT @dWiseTech: FDA/PhUSE Computational Science Symposium 2015 hubs.ly/y0vn1N0 @PHUSETwitta <- Delivery of CDISC Standards in RDF

Feb 07, 2015 · 09:54 PM 2 0

Very nice development by @westurner on @openFDA issue on linking #openfda data github.com/FDA/openfda/is… #linkeddata

Feb 07, 2015 · 09:50 PM 1 1

Replying to @kaythaney

Docker4Data docker4data.com HT @kaythaney #opendata

Feb 07, 2015 · 05:52 PM 1 2

Is Schema.org a game changer for the electronic component industry? linkedin.com/pulse/schemaor… by @wohnjalker #LinkedData

Feb 07, 2015 · 03:31 PM 0 2

Replying to @Sida

I used #devtalks feed from @Sida's Data Revolution event sida.se/Svenska/aktuel… as an example of professionsal use of Twitter HT @pernillan

Feb 06, 2015 · 01:38 PM 2 3

@tomayac Thx Thomas, will see if I can all of that into one draft slide :-) please can you review my attempt

Replying to @tomayac

Feb 06, 2015 · 01:10 PM 0 0

Replying to @tomayac

.@tomayac I'm looking for a current/planned overview of ecosystem of #wikidata, #dbpedia, #freebase, #KnowledgeGraph (#KnowledgeVault), ...

Feb 06, 2015 · 11:23 AM 0 1

See my #FF #FollowFriday 2015 list on why I follow @RebarInter medium.com/@kerfors/my-fo…

Feb 06, 2015 · 07:18 AM 0 0

Replying to @TrishWhetzel

@TrishWhetzel Thx Trish - just joined in time for the Siemens guy

Feb 05, 2015 · 06:36 PM 0 1

Conclusion & Recommendations: #EHR4CR platform deployment in Swedish Hospitals ethical and legal perspective ehr4cr.eu/views/news/ind…

Feb 05, 2015 · 06:19 PM 0 0

Hmm, who should be my fourth #FF #FollowFriday on my 2015 list medium.com/@kerfors/my-fo… - @EricTopol or @RebarInter ?

Feb 05, 2015 · 04:52 PM 0 0

Hadoop Open Platform-as-a-Service (Hops) | Hops Hadoop hops.io

Feb 05, 2015 · 01:58 PM 0 0

Spark meets Genomics: Helping Fight the Big C with the Big D | Spark Summit spark-summit.org/2014/talk/davi…

Feb 05, 2015 · 01:50 PM 0 1

Sorry that the MOOC on @ApacheSpark is delayed (April) when I now have got it confirmed that this is the right thing to learn more about

Feb 05, 2015 · 01:45 PM 0 0

BioBankCloud biobankcloud.com an open-source framework, based on Hadoop, for the secure storage and analysis of Big Data in genomics

Feb 05, 2015 · 01:36 PM 0 0

Re-MT @mikaelhuss: Workshop + hackathon on Hadoop/Spark etc applied to HTS data, Stockholm/Kista 19-20 Feb 2015 biobankcloud.com/?q=node/34

Replying to @mikaelhuss

Feb 05, 2015 · 01:34 PM 0 0

Data processing engines: #spark #flink #storm, in the Data driven systems stack on the slides from @SICS_SwedishICT

Feb 05, 2015 · 01:19 PM 0 1

Great to have Top Swedish IT researchers from @SICS_SwedishICT to talk about #BigData in an internal TechTalk session

Feb 05, 2015 · 01:07 PM 1 5

.@Assero_UK Well, we haven't consider data life cycle beyond submission as @theIOM's report on #datasharing show iom.edu/datasharing

Feb 05, 2015 · 07:06 AM 0 0

.@Assero_UK How do we get this into eSource: "Each item of [clinical] data would be assigned its own URI"? twitter.com/kerfors/status…

Feb 05, 2015 · 07:02 AM 1 0

@Assero_UK Agree, see def in @w3c PROV standard w3.org/TR/prov-overvi… So we should use it, see my earlier tweets twitter.com/kerfors/status…

Feb 05, 2015 · 06:56 AM 0 0

+10 RT @Prototypo: Web Technologies. Now and tomorrow. buff.ly/1DBms4Q #webwewant #futureweb

Feb 04, 2015 · 04:44 PM 0 2

MT @LexJansen: E2E Process, What Is It? assero.co.uk/2015/end-to-en… #cdisc @assero_uk <- it's not the End -> #datasharing iom.edu/datasharing

Feb 04, 2015 · 04:30 PM 0 0

It's soo nice working together with colleagues with "Tinkerer" in their profiles cc: @goude #MakingPowerpointWareReal

Feb 04, 2015 · 04:07 PM 0 0

@pernillan Men så kul! Grattis

Replying to @pernillan

Feb 03, 2015 · 05:08 PM 0 0

Cool: @IFTTT in a nice article by @wieselgren in the local newspaper @GoteborgsPosten blogg.gp.se/teknik/2015/02…

Feb 03, 2015 · 03:55 PM 0 0

Replying to @cbrewster

MT @Zurich: Social instabilit most interconnected w other risks goo.gl/Atyv96 HT @cbrewster <- ping @neo4j

Feb 03, 2015 · 03:50 PM 1 2

Replying to @jharmn

@jharmn How about JSON-LD and Hydra? slideshare.net/lanthaler/buil… by @MarkusLanthaler #api #jsonld

Feb 03, 2015 · 07:32 AM 0 2

Replying to @KirkDBorne

MT @KirkDBorne: Semantic Web And The Automotive Industry: drivedigitalgroup.com/semantic-web-a… by @drivedigitalgrp <- ping @flandqvist

Feb 02, 2015 · 04:38 PM 0 1

@oskthu @callistaent Nice - let's talk

Replying to @oskthu

Feb 02, 2015 · 02:59 PM 0 0

@oskthu Yes, it's now combine in this joint HL7 and W3C subgroup lead by David Booth wiki.hl7.org/index.php?titl…

Replying to @oskthu

Feb 02, 2015 · 02:59 PM 0 1

2nd planning w/ @flandqvist of #LankadeData meetup in Göteborg, late April. Watch out for an early announcement in facebook.com/groups/sswig/

Feb 02, 2015 · 08:31 AM 0 0

I just learned that one of the largest Swedish company block Twitter and YouTube for their employees. 2015! Big #fail

Feb 01, 2015 · 09:03 PM 0 0