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May 2016
Kerstin Forsberg
@kerfors
Replying to
@ontotext
@ontotext
great Thx
May 31, 2016 · 10:22 AM
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Kerstin Forsberg
@kerfors
Replying to
@ontotext
@ontotext
hmm, sorry to see you use webex for the recording, not working on my mobile devices.
May 31, 2016 · 06:27 AM
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Kerstin Forsberg
@kerfors
Replying to
@kerfors
Thank you
@neo4j
for sharing on youtube so I can listen while walking
#Neo4j
#PanamaPapers
youtu.be/tAlu3ud2k_A
May 31, 2016 · 06:21 AM
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Kerstin Forsberg
@kerfors
Replying to
@cdsouthan
@cdsouthan
have no more info than the public - sorry
May 30, 2016 · 02:41 PM
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Kerstin Forsberg
@kerfors
Replying to
@cdsouthan
@cdsouthan
No Idea
May 30, 2016 · 02:15 PM
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Kerstin Forsberg
@kerfors
The hashtag to follow the coming week
#eswc2016
for interesting things about
#semanticweb
#linkeddata
twitter.com/eswc_conf/stat…
May 29, 2016 · 08:33 AM
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3
Kerstin Forsberg
@kerfors
Replying to
@kerfors
Example of an Endpoint: Percent change from baseline in HgbA1C measured at 12 weeks
aolivamd.blogspot.se/2016/05/defini…
@nomini
May 26, 2016 · 07:53 PM
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Kerstin Forsberg
@kerfors
Def. of Endpoint: [1] outcome measures, [2] when [1] is collected, [3] algorithm describing how [1] are combined for analysis (optional).
May 26, 2016 · 07:52 PM
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Kerstin Forsberg
@kerfors
I just realized both
@neo4j
and
@ontotext
did run webinars earlier today about
#panamapapers
as
#LinkedData
and
#neo4j
property graph
May 26, 2016 · 07:20 PM
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Kerstin Forsberg
@kerfors
On my reading list 3(3): Principles of Health Interoperability: SNOMED CT, HL7 and FHIR
amazon.com/dp/3319303686/
May 26, 2016 · 06:26 PM
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Kerstin Forsberg
@kerfors
On my reading list 2(3): Metadata (The MIT Press Essential Knowledge series) by Jeffrey Pomerantz
amazon.com/dp/0262528517
May 26, 2016 · 06:25 PM
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Kerstin Forsberg
@kerfors
On my reading list 1(3): The Business Blockchain: Promise, Practice, and Application of the Next Internet Technology
amazon.com/dp/1119300312/
May 26, 2016 · 06:24 PM
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Kerstin Forsberg
@kerfors
Lots of interesting stuff from
@PHUSETwitta
UK SDE last week
phuse.eu/Cambridge2016.…
Thanks for sharing the presentations
May 26, 2016 · 06:13 PM
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Kerstin Forsberg
@kerfors
utmärkt
#lankadedata
twitter.com/digisam_ra/sta…
May 26, 2016 · 03:39 PM
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Kerstin Forsberg
@kerfors
How blockchain-timestamped protocols could improve the trustworthiness.... Irving G and Holden J,
@F1000Research
,
f1000research.com/articles/5-222…
May 26, 2016 · 07:32 AM
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Kerstin Forsberg
@kerfors
f1000 research channel: All trials matter
f1000research.com/channels/all-t…
#alltrials
May 26, 2016 · 07:32 AM
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Kerstin Forsberg
@kerfors
#WYDIWYS
what you draw is what you store
@rvanbruggen
at
@neo4j
meetup
May 25, 2016 · 06:12 PM
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2
Kerstin Forsberg
@kerfors
Replying to
@lawley
@lawley
And a Tree is a Graph :)
May 25, 2016 · 05:44 PM
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Kerstin Forsberg
@kerfors
Exploring
@neo4j
database with
#panamapapers
in a meetup Gothenburg. Nice presentation by
@rvanbruggen
May 25, 2016 · 04:49 PM
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Kerstin Forsberg
@kerfors
Replying to
@kerfors
Nice first presentation at
@neo4j
meetup Gothenburg when
@rvanbruggen
load
#neo4j
database with
#panamapapers
data
neo4j.com/blog/icij-neo4…
May 25, 2016 · 04:43 PM
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Kerstin Forsberg
@kerfors
This week I'll follow
#bigdatamed
Big Data in Biomedicine Conference (Enabling Precision Health)
@StanfordMed
May 25, 2016 · 03:46 PM
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Kerstin Forsberg
@kerfors
Looking forward to tonight's
@neo4j
meetup in Gothenburg
meetup.com/Graph-Database…
May 25, 2016 · 07:16 AM
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Kerstin Forsberg
@kerfors
Jag gillade också denna underbara grafik och gjorde en mera mekanistisk tolkning
kerfors.blogspot.se/2016/05/awesom…
twitter.com/mingligt/statu…
May 23, 2016 · 10:20 PM
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Kerstin Forsberg
@kerfors
Re-reading Identifier Design Patterns @CamSemantics in the context of URIs for clinical trial data
cambridgesemantics.com/semantic-unive…
May 23, 2016 · 10:17 PM
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Kerstin Forsberg
@kerfors
Thanks John for a great feed from the
#websci16
meeting
twitter.com/olyerickson/st…
May 23, 2016 · 09:25 PM
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Kerstin Forsberg
@kerfors
"the interesting part comes in converting these def:s into OWL, to enable computers to reason across the data"
twitter.com/nomini/status/…
May 23, 2016 · 09:17 PM
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Kerstin Forsberg
@kerfors
Bring data to researcher main problem: "Data Sharing = Data Copying" instead Bring researchers to data in
@BroadFireCloud
May 23, 2016 · 11:40 AM
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Kerstin Forsberg
@kerfors
Replying to
@kerfors
@ReveilleSoftwre
Checkout
#LinkedData
principles and apply them for Documents
May 23, 2016 · 08:48 AM
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Kerstin Forsberg
@kerfors
@Assero_UK good luck
May 23, 2016 · 06:50 AM
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Kerstin Forsberg
@kerfors
Some ideas about "Semantic blockchains in the Clinical Data Supply Chain" triggered by
@cbrewster
's excellent slides
kerfors.blogspot.se/2016/05/global…
May 22, 2016 · 07:16 PM
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Kerstin Forsberg
@kerfors
Replying to
@cdsouthan
@cdsouthan
yepp, we should get that blog on id:s for trials and compound out there. Lunch?
May 22, 2016 · 12:43 PM
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Kerstin Forsberg
@kerfors
Replying to
@cdsouthan
@cdsouthan
@EricTopol
Not w/
@bengoldacre
's
#Alltrials
&
@opentrials
- result level, but
@YODAProject
&
clinicalstudydatarequest.com
- pat. level
May 22, 2016 · 12:31 PM
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Kerstin Forsberg
@kerfors
2 upcoming meetups in Gothenburg on interesting topics:
#neo4j
25 May
meetup.com/Graph-Database…
and
#blockchain
7 Jun
meetup.com/Ethereum-Gothe…
May 22, 2016 · 10:47 AM
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Kerstin Forsberg
@kerfors
Want a Document URI resolver service using @EMCdocumentum DocID (not ObjectID)
#LinkedData
- this looks interesting
msroth.wordpress.com/2014/02/21/doc…
May 22, 2016 · 10:38 AM
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Kerstin Forsberg
@kerfors
New blog post: Awesome graphic as Graphs. Kudos to
@hughcards
@smrvl
and HT to
@futuramb
@jhagel
kerfors.blogspot.se/2016/05/awesom…
May 22, 2016 · 10:03 AM
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Kerstin Forsberg
@kerfors
Short blog post with an idea I may hope for some help of from my
#LinkedData
/
#SemanticWeb
and
@neo4j
friends
kerfors.blogspot.se/2016/05/awesom…
May 22, 2016 · 09:39 AM
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Kerstin Forsberg
@kerfors
Replying to
@jhagel
data->info->knowledge by
@hughcards
, now with ->insight->wisdom by
@smrvl
makes in awesome, via
@futuramb
@jhagel
twitter.com/jhagel/status/…
May 22, 2016 · 08:44 AM
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Kerstin Forsberg
@kerfors
Cool :)
twitter.com/buzzfrog/statu…
May 20, 2016 · 03:56 PM
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Kerstin Forsberg
@kerfors
@NovasTaylor :-( No good
May 20, 2016 · 03:55 PM
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Kerstin Forsberg
@kerfors
Long blog post to read from Jozef Aerts
#xml4pharma
CDISC end-to-end: Electronic Health Record Data in SDTM
cdisc-end-to-end.blogspot.se/2016/05/electr…
May 20, 2016 · 03:41 PM
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Kerstin Forsberg
@kerfors
Replying to
@kerfors
@Farzad_Frasse check out
kerfors.blogspot.se/2016/05/global…
May 20, 2016 · 03:28 PM
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Kerstin Forsberg
@kerfors
Clinical Trial Data Identifiers - URIs and
#Blockchains
kerfors.blogspot.se/2016/05/global…
Thanks Dave (@Assero_UK) for your comment on my blog
May 20, 2016 · 03:26 PM
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Kerstin Forsberg
@kerfors
Very happy to have Harold Solbrig, Mayo Clinic, and Eric P, W3C, to speak about
#FHIR
,
#RDF
and
#ShEX
to our internal
#LinkedData
community
May 20, 2016 · 01:41 PM
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Kerstin Forsberg
@kerfors
#FHIR
STU3 is planned to include: Introduction of RDF, tied to an ontological base
twitter.com/grahamegrieve/…
May 20, 2016 · 07:26 AM
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Kerstin Forsberg
@kerfors
New blog post: Global, persistent and resolvable identifiers for clinical data
kerfors.blogspot.se/2016/05/global…
HT
@nomini
@Assero_UK
@pinnacle_21
May 19, 2016 · 08:18 PM
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Kerstin Forsberg
@kerfors
"Ideally, the identifier is globally unique. This brings us closer to creating a web of clinical data."
aolivamd.blogspot.se/2016/05/improv…
HT
@nomini
May 19, 2016 · 05:32 PM
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Kerstin Forsberg
@kerfors
Replying to
@kerfors
@Assero_UK
@plample_
@nomini
@NovasTaylor .. SDTM domains. For storage: maybe Computer-Based Patient Record Ontology
code.google.com/archive/p/cpr-…
May 19, 2016 · 06:37 AM
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Kerstin Forsberg
@kerfors
@Assero_UK
@plample_
@nomini
@NovasTaylor For "Concepts/BCs": CIMI & OpenEHR Archetypes for "I "Interaction Containers": FHIR resources &...
May 19, 2016 · 06:34 AM
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Kerstin Forsberg
@kerfors
Replying to
@plample_
@plample_
Well, I'm less convinced about BRIDG
@nomini
@Assero_UK @NovasTaylor
May 18, 2016 · 08:47 PM
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Kerstin Forsberg
@kerfors
Replying to
@plample_
@plample_
Agree, and I think
@nomini
, @Assero_UK, @NovasTaylor all say the same thing. So, the question becomes - using what schema?
May 18, 2016 · 08:28 PM
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Kerstin Forsberg
@kerfors
No 1: "SDTM should incorporate unique identifiers for each record in each domain." <- Yes!
twitter.com/nomini/status/…
May 18, 2016 · 07:30 PM
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Kerstin Forsberg
@kerfors
Reading a long, nice post by Dave I-H after
#cdiscEurope
about the need for a
#CDISC20
w/ shout-out to
#CDISC2RDF
twitter.com/assero_uk/stat…
May 18, 2016 · 03:37 PM
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Kerstin Forsberg
@kerfors
Nice use case for
#blockchain
cc:
@MCRInformatics
twitter.com/farzad_frasse/…
May 18, 2016 · 03:07 PM
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Kerstin Forsberg
@kerfors
Just found: Linking Open Data for Rare Diseases (LORD) using
@Orphanet
Rare Disease Ontology
enlord.bndmr.fr
#LInkedData
May 17, 2016 · 09:04 PM
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Kerstin Forsberg
@kerfors
@NovasTaylor Yes would be great if
CT.gov
do as
@openFDA
Would be even better with URIs, see
github.com/FDA/openfda/is…
May 17, 2016 · 04:57 PM
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Kerstin Forsberg
@kerfors
Could be much better if: 2/2 "Things not strings"
kerfors.blogspot.se/2015/02/clinic…
twitter.com/everyclinicalt…
May 17, 2016 · 03:24 PM
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Kerstin Forsberg
@kerfors
Could be much better if: 1/2 Result data and metadata as
#LinkedData
see
phusewiki.org/wiki/index.php…
cc: @NovasTaylor
twitter.com/everyclinicalt…
May 17, 2016 · 03:21 PM
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Kerstin Forsberg
@kerfors
Sharing
@wilbanks
' excellent article with colleagues: First, design for data sharing
#datasharing
nature.com/nbt/journal/va…
May 17, 2016 · 02:58 PM
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Kerstin Forsberg
@kerfors
Cool :)
twitter.com/novastaylor/st…
May 16, 2016 · 01:54 PM
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Kerstin Forsberg
@kerfors
Replying to
@lakemedel
@lakemedel
Intressant!
May 16, 2016 · 07:58 AM
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Kerstin Forsberg
@kerfors
Two events this week, a bit off topic for me, but I will even so try to follow them remotely
#ICHOM2016
@ICHOM_ORG
|
#ATS2016
@atscommunity
May 16, 2016 · 07:54 AM
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Kerstin Forsberg
@kerfors
Well, just because we place the data "in the cloud" does not mean it is
#LinkedData
5stardata.info/en/
twitter.com/kevin2kelly/st…
May 15, 2016 · 08:31 PM
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Kerstin Forsberg
@kerfors
Bookmarked: "A data-driven concept schema for defining clinical research data needs" on CiteUlike
ift.tt/27mytLQ
May 14, 2016 · 03:54 PM
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Kerstin Forsberg
@kerfors
I've joined the
meetup.com/Graph-Database…
#neo4j
May 14, 2016 · 09:26 AM
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Kerstin Forsberg
@kerfors
Interesting about challenges with
@wikidata
#linkeddata
out of context organized using
#semanticweb
HT
@ABLVienna
twitter.com/oxfordsmartcit…
May 13, 2016 · 07:10 AM
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Kerstin Forsberg
@kerfors
+1
twitter.com/gray_alasdair/…
May 12, 2016 · 08:11 PM
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Kerstin Forsberg
@kerfors
Bookmarked: "Avoiding Data Dumpsters — Toward Equitable and Useful Data Sharing" on CiteUlike
ift.tt/21ZeTBt
May 12, 2016 · 06:34 AM
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Kerstin Forsberg
@kerfors
Interesting, pragmatic overview. I like both
#RDF
triple store and
#Neo4j
graph DB. IMHO
#LinkedData
URIs important
twitter.com/neo4j/status/7…
May 12, 2016 · 06:27 AM
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Kerstin Forsberg
@kerfors
Neo4j for
@emblebi
's Ontlogy Lockup Service. Like the way it combines
#LinkedData
URIs and
#Neo4j
HT
@simonjupp
github.com/EBISPOT/OLS/bl…
May 12, 2016 · 06:23 AM
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Kerstin Forsberg
@kerfors
Replying to
@wilbanks
@wilbanks
thoughts?
twitter.com/brianpardy/sta…
May 11, 2016 · 03:57 PM
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Kerstin Forsberg
@kerfors
Replying to
@alvarograves
@alvarograves
trying to understand - supplementaries or competitors? 2 v. smart people behind them: SHACL
@HolgerKnublauch
, ShEX Eric P
@w3c
May 09, 2016 · 07:03 PM
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Kerstin Forsberg
@kerfors
SHEX - Shape Expressions, Validation, traversal and transformation of RDF graphs
shex.io
May 09, 2016 · 06:39 PM
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Kerstin Forsberg
@kerfors
This week I will follow
#hdpalooza
@hdpalooza
May 09, 2016 · 06:10 PM
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Kerstin Forsberg
@kerfors
In the bottom of the page, click on [+ April]. Missing slides from Beverly Buckta, Pfizer, on using FHIR for mHealth
twitter.com/hl7/status/727…
May 08, 2016 · 02:31 PM
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Kerstin Forsberg
@kerfors
Replying to
@kerfors
Jozef Aerts' slides for his
#CDISCEurope
talk: A visionary View on the Future of CDISC Standards
xml4pharma.com/slides/Present…
May 06, 2016 · 07:00 PM
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1
Kerstin Forsberg
@kerfors
Updated blog post
kerfors.blogspot.se/2016/05/twitte…
with link to
@WayneKubick
's blog post from
@HL7
's “Partners in Interoperability” workshop
May 06, 2016 · 06:20 PM
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Kerstin Forsberg
@kerfors
New Blog post: Twitter Feeds and Blog posts from Conferences
kerfors.blogspot.se/2016/05/twitte…
inspired by the great
#csvconf
feed earlier this week
May 06, 2016 · 04:51 PM
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Kerstin Forsberg
@kerfors
Traffic to my 2013, Febr Blogpost on
#CDISC2RDF
kerfors.blogspot.se/2013/02/cdisc2…
Posted a comment linking to CDISC 2015, July
cdisc.org/rdf
May 06, 2016 · 03:56 PM
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Kerstin Forsberg
@kerfors
Re. trial protocol: "moving away from the traditional ‘schedule of assessments’ grid; more of a subject timeline approach" --@Assero_UK
May 06, 2016 · 03:52 PM
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Kerstin Forsberg
@kerfors
And one the best conferences I have followed remotely - Thanks all for a great
#csvconf
feed
twitter.com/blahah404/stat…
May 06, 2016 · 03:40 PM
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Kerstin Forsberg
@kerfors
Agree, the
#csvkonf
feed is great reading on the bus home
twitter.com/jhollist/statu…
May 04, 2016 · 04:17 PM
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Kerstin Forsberg
@kerfors
Event to follow this week
#csvconf
twitter.com/csvconference/…
May 03, 2016 · 06:14 AM
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Kerstin Forsberg
@kerfors
Excellent for us not being able to attend
#CDISCEurope
. Thanks Magnus
twitter.com/cmwallberg/sta…
May 02, 2016 · 03:09 PM
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